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NBDC Human Database

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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Release info for hum0201

  • hum0201-v9

    2026-04-21
    Datasets added in this release
    Release note
    DNAs/RNAs extracted from organoids established from normal and tumor tissues of the patients with colon cancer, duodenal adenoma and stomach cancer or a healthy individual or genetically engineered organoids were used for the whole exome and RNA sequencing analyses. Fastq files are provided.
  • hum0201-v8

    2024-08-28
    Datasets added in this release
    Release note
    DNAs/RNAs extracted from pancreatic cancer organoids or genetically engineered pancreatic duct organoids were used for the whole exome, RNA, scRNA, ATAC and ChIP sequencing analyses. Fastq and bed files are provided.
  • hum0201-v7

    2022-12-27
    Datasets added in this release

    No datasets were added.

    Release note
    The alignment results [CRAM], variant call results per sample [gVCF], and variant call results per dataset [aggregated VCF] processed JGAD000335 in a certain workflow were provided. If you plan to use the data, please indicate both original data (JGAD000335) and processed data (JGAD000687) on the application form for data use.
  • hum0201-v6

    2022-08-05
    Datasets added in this release
    Release note
    RNAs extracted from normal colonic tissue from a neoplastic disease patient was used for the single cell RNA sequencing analysis. DNAs and RNAs extracted from organoids established from healthy normal colonic tissues of the patients were used for the whole genome and RNA sequencing analyses. Fastq files are provided.
  • hum0201-v5

    2022-06-06
    Datasets added in this release
    Release note
    RNAs extracted from organoids derived from colon cancer tissues from neoplastic disease patients were used for the RNA sequencing analysis. Fastq files are provided.
  • hum0201-v4

    2021-11-19
    Datasets added in this release
    Release note
    DNAs and RNAs extracted from organoids established from colon cancer tissues and a normal epithelial tissue of the patients were used for RNA sequencing and ChIP-seq analyses. Fastq files are provided.
  • hum0201-v3

    2020-11-20
    Datasets added in this release
    Release note
    Gene expression of 2D normal duodenum organoids with or without medium rotation was analyzed. Total RNA was extracted from organoids with or without a four-day medium rotation, and after 0, 1, 2 or 4 days of medium rotation, and sequenced with HiSeq X Ten. Fastq files are provided.
  • hum0201-v2

    2020-10-06
    Datasets added in this release
    Release note
    DNAs and RNAs extracted from peripheral blood cells and organoids established from normal and cancer tissues of the patients were used for the whole genome and RNA sequencing analysis. Fastq files are provided.
  • hum0201-v1

    2019-12-20
    Datasets added in this release
    Release note
    DNAs extracted from inflammatory/tumor tissues from gastrointestinal inflammatory disease patients, peripheral blood cells from patients/controls, and the organoids established from epithelial tissues from patients were used for the whole exome sequencing analysis. Fastq files are provided.