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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000359

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
39.1 GB
File formats
  • FASTQ
Research
hum0201
Date published
2020-11-20
Date modified
2020-11-20
DDBJ Search
JGAD000359 (opens in a new tab)
JGA Study
JGAS000256 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Neoplastic disease (ICD10: C16): 1 case (1 sample)
  • Health status
    Affected
  • Subject count
    1 (Individual)
Disease
Neoplastic disease (C16)
Sample description
Total RNA extracted from normal duodenum organoids with or without a four-day medium rotation, and after 0, 1, 2 or 4 days of medium rotation
  • Tissue
    Duodenum organoid
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
TruSeq RNA Library Prep Kit
TruSeq Stranded mRNA Library Prep Kit
Fragmentation
Heat treatment
Platform
Illumina HiSeq X
Read type
Paired-end
Read length
250 bp
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)