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Dataset ID

JGAD000464

Type of data: NGS (RNA-seq)
Access criteria: Controlled-access (Type I)
Total data volume: 46.5 GB
File formats: FASTQ
Research: hum0201
Date published: 2022-06-06
Date modified: 2022-06-06
DDBJ Search: JGAD000464 (opens in a new tab)
JGA Study: JGAS000350 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants: Neoplastic disease (ICD10: C16): 2 cases (11 samples); Health status
Affected
Subject count
11 (Sample)
Disease: Neoplastic disease (C16)
Sample description: RNAs extracted from organoids derived from colon cancer tissues; Tissue
Colon, Organoid
Tumor / normal
Tumor
Sample provider: N/A
Experimental method: RNA-seq
Target: N/A
Reagent kit: TruSeq RNA Library Prep Kit
TruSeq Stranded mRNA Library Prep Kit
Fragmentation: Heat treatment
Platform: Illumina HiSeq 4000
Read type: Paired-end
Read length: 250 bp
150 bp
Data use policy: NBDC data sharing policy (JGAP000001)