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Aims: DNA methylome analyses and expression analysis for malignant glioma harbouring H3F3A gene mutation
Methods: PBAT-seq, RNA-seq and ChIP-seq
Targets: 14 Malignant glioma patients and 1 cell line
Dataset ID | Access type | Type of data | Release date | |
|---|---|---|---|---|
| JGAD000280 | Controlled-access (Type I) | NGS (PBAT-seq, RNA-seq, ChIP-seq) | 2020-09-28 | |
| JGAD000281 | Controlled-access (Type I) | NGS (PBAT-seq, RNA-seq, ChIP-seq) | 2020-09-28 | |
| JGAD000282 | Controlled-access (Type I) | NGS (PBAT-seq, RNA-seq, ChIP-seq) | 2020-09-28 | |
Name | URL |
|---|---|
| No data | |
Name | Title | Project number |
|---|---|---|
| Platform Project for Supporting Drug Discovery and Life Science Research, Japan Agency for Medical Research and Development (AMED) | Improvements and support in methylome analysis |
|
| Platform Project for Supporting Drug Discovery and Life Science Research, Japan Agency for Medical Research and Development (AMED) | Advanced methylomics: support and development |
|
| KAKENHI Grant-in-Aid for Scientific Research on Priority Areas (Research in a proposed research area) | Development and applications of next generation epigenome analysis technologies |
|
Title | DOI | Datasets |
|---|---|---|
| Highly efficient single-stranded DNA ligation technique improves low-input whole-genome bisulfite sequencing by post-bisulfite adaptor tagging | https://doi.org/10.1093/nar/gkz435 | |
Principal Investigator | Affiliation | Country/Region | Research title | Period of data use | Data in use (Dataset ID) |
|---|---|---|---|---|---|
| Hamada Michiaki | Waseda University | Japan | Construction of RNA-targeted Drug Discovery Database | 2023-01-05—2027-10-31 | |