We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.
- Release date
- 2020-09-28
- Date modified
- 2020-09-28
- Research
- hum0177
- Type of data
- NGS (PBAT-seq, RNA-seq, ChIP-seq)
- Access type
- Controlled-access (Type I)
- JGA Study
- JGAS000197
Analysis method
ChIP-seq
- Materials and Participants
1 Cell line of malignant glioma (ICD10: C71.9)
- Experimental Method
ChIP-seq
- Platform
Illumina [NovaSeq 6000]
- Sample Description
DNAs extracted from a cell line of malignant glioma (1 control [whole cell lysate] and 2 immunoprecipitation samples). Anti- histone H3.3 rabbit monoclonal antibody and anti- histone H3.3 G34V rabbit monoclonal antibody were used for immunoprecipitation.
- Cell Lines
IFO50356 (JCRB)
- Library Construction
SMARTer ThruPLEX DNA-seq Kit
- Fragmentation
Ultrasonic fragmentation (Covaris S220)
- Read Type
Paired-end
- Read Length
150 bp
- Japanese Genotype-phenotype Archive Dataset Accession
- Total Data Volume
1 TB (fastq)
- Policies