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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0014-v3Release info

This page is a past version (v3). The latest version is v37.
Latest version (v37)

Research title

Bio Bank Japan project

Research overview

Aims
Identify disease-related genes in Japanese
Methods
Genomic DNA samples were genotyped by following methods: Human610-Quad BeadChip, HumanHap550v3 Genotyping BeadChip, OmniExpressExome BeadChip (Illumina), high-density oligonucleotide arrays (Perlegen Sciences), or Invader (Hologic Japan). Genome-Wide Association Studies (GWAS) for myocardial infarction (MI) and type II diabetes mellitus (T2DM) were performed using about 500K SNPs.
Participants/materials
Participants for the Tailor-made Medical Treatment Program (BioBank Japan: BBJ)
URL

Datasets

The list is the one this version published; each dataset's content is shown as it is now.

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
NHA000001GWAS for MI
  • Genotyping by array
Unrestricted-access2014-09-30
NHA000008Genotype frequencies in 934 healthy individuals
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000031Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000014Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000040Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000017Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000035Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000028Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000032Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000041Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000039Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000011Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000012Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000019Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000015Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000030Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000037Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000013Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000018Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000027Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000016Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000025Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000023Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000036Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000043Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000033Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000042Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000022Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000034Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000038Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000010Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000026Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000009Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000020Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000029Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000021Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000024Genotype frequencies in each disease
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000006Genotype frequencies in 182 esophageal cancer patients
(JSNP data)
  • Genotyping by array
Unrestricted-access2015-12-28
NHA000007Genotype frequencies in 92 amyotrophic lateral sclerosis (ALS) patients
(JSNP data)
  • Case-control association study (Invader genotyping)
Unrestricted-access2015-12-28
NHA000044GWAS for T2DM [1]
  • Genotyping by array
Unrestricted-access2016-01-28
NHA000045GWAS for T2DM [2]
  • Genotyping by array
Unrestricted-access2016-01-28

Data provider

Principal investigator
Michiaki Kubo
Affiliation
RIKEN Center for Integrative Medical Sciences

Research projects

NameURL
Tailor-made Medical Treatment Program (Bio Bank Japan: BBJ)

Grants

NameTitleProject number
Ministry of Education, Culture, Sports, Science and Technology in Japan
Tailor-made Medical Treatment Program (the 3rd phase)
N/A

Related publications

TitleDOIDataset ID
A genome-wide association study identifies PLCL2 and AP3D1-DOT1L-SF3A2 as new susceptibility loci for myocardial infarction in Japanese.
https://doi.org/10.1038/ejhg.2014.110 (opens in a new tab)
A functional variant in ZNF512B is associated with susceptibility to amyotrophic lateral sclerosis in Japanese.
https://doi.org/10.1093/hmg/ddr268 (opens in a new tab)
Functional variants in ADH1B and ALDH2 coupled with alcohol and smoking synergistically enhance esophageal cancer risk.
https://doi.org/10.1053/j.gastro.2009.07.070 (opens in a new tab)
SNPs in KCNQ1 are associated with susceptibility to type 2 diabetes in East Asian and European populations.
https://doi.org/10.1038/ng.208 (opens in a new tab)
Common variants in a novel gene, FONG on chromosome 2q33.1 confer risk of osteoporosis in Japanese.
https://doi.org/10.1371/journal.pone.0019641 (opens in a new tab)
Genome-wide association studies in the Japanese population identify seven novel loci for type 2 diabetes.
https://doi.org/10.1038/ncomms10531 (opens in a new tab)