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Dataset ID

NHA000007

Type of data: Genotype frequencies in 92 amyotrophic lateral sclerosis (ALS) patients
(JSNP data)
Access criteria: Unrestricted-access
Total data volume: 3.3 MB
File formats: XLSX
ZIP
Research: hum0014
Date published: 2015-12-28
Date modified: 2015-12-28
Secondary ID: hum0014.v2.jsnp.92als.v1

Unrestricted-access files linked to this dataset

Download the URL list

File	Label	Size	Copy URL
hum0014.v2.jsnp.92als.v1.zip		3.3 MB
hum0014.v2.jsnp.92als_Dic.xlsx	Dictionary file	33.3 KB

Analysis method

Case-control association study (Invader genotyping)

Materials and participants: 92 ALS patients (JSNP)
Sample description: gDNA extracted from peripheral blood cells; Tissue
Peripheral blood
Sample provider: N/A
Target: N/A
Platform: Hologic Japan Invader
QC and filtering: SNP call rate ≥ 0.95, HWE P ≥1.0 x 10^-2
Analysis method: ABI PRISM SDS versions 2.0 - 2.2
Variant count: 48,939 SNPs
Data use policy: NBDC data sharing policy (JGAP000001)