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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0114-v3Release info

Latest

Research title

Research on statistical genetics using B cell lines of Japanese ancestry

Research overview

Aims
Analysis of statistical genetics using cell line genotype data of Japanese ancestry
Methods
Genome-wide association study for psoriasis, Target capture sequence for HLA regioin, Construction of imputation reference panel of the KIR region
Participants/materials
Cell line genotype data of Japanese ancestry
URL
N/A

Datasets

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
NHA000059GWAS for psoriasis
  • Genotyping by array
Unrestricted-access2017-12-18
DRA007411NGS (Target Capture)
  • Targeted DNA sequencing
Unrestricted-access2019-01-28
JGAD000425NGS (WGS + Target Capture, Target Capture)
  • WGS + Targeted DNA sequencing
Controlled-access (Type I)2021-08-10

Data provider

Principal investigator
Yukinori Okada
Affiliation
Department of Statistical Genetics, Osaka University Graduate School of Medicine

Research projects

No research projects.

Grants

NameTitleProject number
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas
Cancer drug discovery based on statistical genetics and big data
  • 15H05911
KAKENHI Grant-in-Aid for Young Scientists (A)
Identification of autoimmune disease biomarkers using HLA imputation
  • 15H05670
Advanced Genome Research and Bioinformatics Study to Facilitate Medical Innovation (GRIFIN), Platform Program for Promotion of Genome Medicine, Japan Agency for Medical Research and Development (AMED)
Implementation of genomic prediction medicine based on statistical genetics
  • JP21km0405211

Related publications

TitleDOIDataset ID
Variants at HLA-A, HLA-C, and HLA-DQB1 confer risk of psoriasis vulgaris in Japanese
https://doi.org/10.1016/j.jid.2017.10.001 (opens in a new tab)
Genetic and phenotypic landscape of the major histocompatibilty complex region in the Japanese population.
https://doi.org/10.1038/s41588-018-0336-0 (opens in a new tab)

Controlled access users

Principal investigatorAffiliationCountry/RegionResearch titlePeriod of data useDataset ID
Taisei MushirodaRIKEN Center for Integrative Medical SciencesJapanSNP analysis of wheat allergy2021-03-26 – 2028-03-31
Koya FukunagaMedical safety science, National institute of health sciencesJapanResearch on the diagnosis, treatment, and biomarkers for severe cutaneous adverse reactions2023-02-10 – 2026-03-02
Koya FukunagaMedical safety science, National institute of health sciencesJapanResearch on the biomarkers associated with drug-induced interstitial pneumonia2023-02-10 – 2026-03-02
Koya FukunagaMedical safety science, National institute of health sciencesJapanResearch on the biomarkers associated with drug-induced liver injury 2023-02-10 – 2024-04-02
Koya FukunagaMedical safety science, National institute of health sciencesJapanResearch on the biomarkers associated with drug-induced myopathy 2023-02-10 – 2026-03-02
Kouya ShiraishiDepartment of Clinical Genomics, National Cancer Center Research InstituteJapanSearch for genes involved in susceptibility to lung cancer2024-06-24 – 2025-12-15
Nobuhisa MizukiDepartment of Ophthalmology, Yokohama City University School of MedicineJapanMapping of susceptibility genes for Behcet's disease2024-08-01 – 2025-04-04
Taisei MushirodaLaboratory for Pharmacogenomics, RIKEN Center for Integrative Medical SciencesJapanSearch of genomic biomarkers associated with drug-induced eruptions2024-08-01 – 2028-03-31