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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
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Dataset ID

NHA000063

Type of data
GWAS for 107 HCV patients with decrease of PLT in response to PEG-IFN/RBV treatment and 196 HCV patients without decrease of PLT in response to PEG-IFN/RBV treatment
Access criteria
Unrestricted-access
Total data volume
21.2 KB
File formats
  • CSV
  • XLSX
Research
hum0074
Date published
2018-02-27
Date modified
2018-02-27
Secondary ID
hum0074.v1.plt.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0074.v1.plt.v1.csv8.8 KB
hum0074.v1_header.xlsxDictionary file12.4 KB

Analysis method

Genotyping by array

Materials and participants
decrease of PLT in response to PEG-IFN/RBV treatment
107 HCV patients with decrease of PLT
196 HCV patients without decrease of PLT
  • Health status
    Affected
  • Subject count
    303 (Individual)
Sample description
gDNA extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Genome-Wide Human SNP Array 6.0 Kit
Platform
Affymetrix Genome-Wide Human SNP Array 6.0
Reference genome
NCBI36
QC and filtering
Sample call rate < 0.95, SNP call rate < 0.95,
HWE P < 0.001, Chi-square test (allelic model) P < 1 x 10^-4
Analysis method
Birdseed version 3
Variant count
66 SNPs
Data use policy
NBDC data sharing policy (JGAP000001)