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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001103

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
441 GB
File formats
  • FASTQ
Research
hum0257
Date published
2026-11-05
Date modified
2026-11-05
DDBJ Search
JGAD001103 (opens in a new tab)
JGA Study
JGAS000957 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Pancreatic cancer: 11 cases
- organoids derived from tumor tissues: 11 samples
intraductal papillary mucinous neoplasm (IPMN): 2 cases
- organoids derived from tumor tissues: 2 samples
IPMN-derived pancreatic cancers: 3 cases
- organoids derived from tumor tissues: 3 samples
Non-tumor pancreatic tissue: 1 case
- organoids derived from pancreatic tissue: 1 sample
  • Health status
    Affected
  • Subject count
    17 (Individual)
  • Population
    Japanese
Disease
  • pancreatic Pancreatic cancer
  • intraductal papillary mucinous neoplasm
Sample description
RNAs extracted from organoids established from pancreatic tumors or non-tumors
  • Tissue
    Organoid, Pancreas
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
Long read RNA-seq
Target
N/A
Reagent kit
Ligation Sequencing Kit (SQK-LSK110)
Fragmentation
g-TUBE (Covaris)
Platform
Oxford Nanopore Technologies MinION
Read type
Single-end
Read length
830 bp (Mean)
Data use policy
NBDC data sharing policy (JGAP000001)