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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001102

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Research
hum0606
DDBJ Search
JGAD001102 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Endometrial cancer: 1 case
1 fresh-frozen tumor tissue, 1 cytology specimen
Breast cancer cell line-derived xenograft: 1 model
1 fresh-frozen tumor tissue, 1 cytology specimen
  • Health status
    Affected
  • Subject count
    4 (Sample)
  • Sex
    Female
Disease
  • Endometrial cancer
  • Breast cancer
Sample description
RNAs extracted from tumor tissues
  • Tissue
    Uterus
  • Tumor / normal
    Tumor
Sample provider
Breast cancer cell line: BT-474 (ATCC ID: HTB-20)
Experimental method
RNA-seq
Target
N/A
Reagent kit
Illumina Stranded Total RNA Prep, Ligation with Ribo-Zero Plus
Fragmentation
Heat treatment with reagents
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
100 bp
Data use policy
NBDC data sharing policy (JGAP000001)