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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000938

Type of data
NGS (WGS)
Access criteria
Controlled-access (Type I)
Total data volume
415 GB
File formats
  • FASTQ
Research
hum0580
Date published
2026-05-21
Date modified
2026-05-21
DDBJ Search
JGAD000938 (opens in a new tab)
JGA Study
JGAS000796 (opens in a new tab)

Analysis method

WGS

Materials and participants
gastric-type cervical adenocarcinoma (ICD10: C539): 1 case
tumor tissue: 2 samples
tumor organoid derived from patient's tumor tissues: 2 samples
normal tissue (PBMC): 1 sample
  • Health status
    Affected
  • Subject count
    1 (Individual)
Disease
gastric-type cervical adenocarcinoma (C539)
Sample description
DNAs extracted from tumor tissues, tumor organoids and normal tissue
  • Tissue
    Cervix, Organoid, PBMC, Peripheral blood
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WGS
Target
N/A
Reagent kit
NovaSeq 6000 S4 Reagent Kit v1.5
Fragmentation
Ultrasonic fragmentation
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)