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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000597

Type of data
NGS (scRNA-seq, TCR-seq)
Access criteria
Controlled-access (Type I)
Total data volume
720 GB
File formats
  • FASTQ
Research
hum0320
Date published
2022-01-24
Date modified
2022-01-24
DDBJ Search
JGAD000597 (opens in a new tab)
JGA Study
JGAS000480 (opens in a new tab)

Analysis method

scRNA-seq

Materials and participants
lung adenocarcinoma (ICD10: C349): 2 cases
head and neck cancer (ICD10: C760): 3 cases
tumor tissue: 1 sample each
lymph node: 1 sample each
peripheral blood; 1 sample each
(Total 15 samples)
  • Health status
    Affected
  • Subject count
    5 (Individual)
Disease
lung adenocarcinoma (C349)
head and neck cancer (C760)
Sample description
RNAs extracted from a single T cell isolated from tumor tissues, lymph node,s and peripheral blood cells
  • Tissue
    Lymph node, Peripheral blood
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Reagent kit
Chromium Next GEM Single Cell 5' v2
Fragmentation
Hybrid Selection
Platform
MGI DNBSEQ-G400
Read type
Paired-end
Read length
100 bp (Mean)
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)

TCR-seq

Materials and participants
lung adenocarcinoma (ICD10: C349): 2 cases
head and neck cancer (ICD10: C760): 3 cases
tumor tissue: 1 sample, lymph node: 1 sample, peripheral blood; 1 sample, Total 15 samples
  • Health status
    Affected
  • Subject count
    5 (Individual)
Disease
lung adenocarcinoma (C349)
head and neck cancer (C760)
Sample description
RNAs extracted from a single T cell isolated from tumor tissue, lymph node and peripheral blood
  • Tissue
    Lymph node, Peripheral blood
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
TCR-seq
Target
N/A
Reagent kit
Chromium Next GEM Single Cell 5' v2
Fragmentation
Hybrid Selection
Platform
MGI DNBSEQ-G400
Read type
Paired-end
Read length
100 bp (Mean)
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)