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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000474

Type of data
NGS (WGS)
Access criteria
Controlled-access (Type I)
Total data volume
3.3 TB
File formats
  • FASTQ
  • VCF
  • BEDPE
Research
hum0094
Date published
2021-10-12
Date modified
2021-10-12
DDBJ Search
JGAD000474 (opens in a new tab)
JGA Study
JGAS000360 (opens in a new tab)

Analysis method

WGS

Materials and participants
Lung adenocarcinoma (ICD10: C34): 7 cases (tumor tissues and paired non-tumor tissues for 3 cases; tumor tissues only for 4 cases)
MSI-H CRC (ICD10: C18, C19, C20): 12 cases (tumor tissues and paired non-tumor tissues)
Triple negative breast cancer (ICD10: C50): 11 cases (tumor tissues only)
  • Health status
    Affected
  • Subject count
    30 (Individual)
Disease
Lung adenocarcinoma (C34)
MSI-H CRC (C18, C19, C20)
Triple negative breast cancer (C50)
Sample description
DNAs extracted from tumor and non-tumor tissues
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WGS
Target
N/A
Reagent kit
Chromium Genome Library Kit
Fragmentation
10x Genomics Chromium Genome Sequencing Solution
Platform
10x Genomics Chromium
Read type
Paired-end
Read length
125 bp
Reference genome
GRCh38
Data use policy
NBDC data sharing policy (JGAP000001)