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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000343

Type of data
NGS (Target Capture)
Access criteria
Controlled-access (Type I)
Total data volume
128 GB
File formats
  • FASTQ
  • BAM
Research
hum0242
Date published
2021-01-06
Date modified
2021-01-06
DDBJ Search
JGAD000343 (opens in a new tab)
JGA Study
JGAS000243 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants
Colorectal cancer (ICD10: C189): 12 cases
primary tumor tissue: 42 samples
PBMC: 12 samples
  • Health status
    Affected
  • Subject count
    12 (Individual)
Disease
Colorectal cancer (C189)
Sample description
DNAs extracted from primary tumor tissues and PBMC
  • Tissue
    PBMC, Peripheral blood
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
Targeted DNA sequencing
Target
Coding regions of the 151 disease-associated genes
ClearSeq SS Comprehensive Cancer kits
Reagent kit
ClearSeq Comprehensive Cancer Kit
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2000
Read type
Paired-end
Read length
100 bp
Reference genome
GRCh37
Data use policy
NBDC data sharing policy (JGAP000001)