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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000324

Type of data
NGS (scRNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
727 GB
File formats
  • FASTQ
  • BAM
  • TXT
  • CSV
  • TAR
Research
hum0229
Date published
2020-09-28
Date modified
2025-10-29
DDBJ Search
JGAD000324 (opens in a new tab)
JGA Study
JGAS000230 (opens in a new tab)

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
commitment_hum0229.pdf257 KB
commitment_hum0229_e.pdf140 KB

Analysis method

scRNA-seq

Materials and participants
7 supercentenarians
(7 for total RNA library, 2 of 7 for TCR library)
2 family members
2 unrelated donors
  • Health status
    Healthy
  • Subject count
    11 (Individual)
  • Age group
    Elderly
Sample description
total RNA library: RNAs extracted from PBMC
TCR library: RNAs extracted from CD4+ T Cell
  • Tissue
    CD4+ T cell, PBMC, Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
scRNA-seq
Target
TCR library: TCR region
Reagent kit
Chromium Single Cell 3' v2
Chromium Single Cell 5'
Chromium Single Cell V(D)J Enrichment Kit
Fragmentation
Enzymatic Fragmentation
Platform
Illumina HiSeq 2500
Read type
Paired-end
Read length
total RNA library: 98 bp
TCR library: 150 bp
Data use policy
Familial Policy (JGAP000006)
JGAP000012 Policy
NBDC data sharing policy (JGAP000001)