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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000273

Type of data
NGS (WGS)
Access criteria
Controlled-access (Type I)
Total data volume
1.6 TB
File formats
  • FASTQ
Research
hum0195
Date published
2021-04-02
Date modified
2021-04-02
DDBJ Search
JGAD000273 (opens in a new tab)
JGA Study
JGAS000190 (opens in a new tab)

Analysis method

WGS

Materials and participants
nodule-in-nodule hepatocellular carcinoma (ICD10: C220): 5 cases (total: 23 samples)
tumor tissues: 14 samples
non-tumor tissues: 5 samples
lymphocytes isolated from peripheral blood: 4 samples
  • Health status
    Affected
  • Subject count
    23 (Sample)
Disease
nodule-in-nodule hepatocellular carcinoma (C220)
Sample description
DNAs extracted from tumor tissues, non-tumor tissues, and lymphocytes isolated from peripheral blood of hepatocellular carcinoma
  • Tissue
    Lymphocyte
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WGS
Target
N/A
Reagent kit
TruSeq DNA PCR-Free Library Prep Kit
Fragmentation
Ultrasonic fragmentation
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
100 bp
Data use policy
NBDC data sharing policy (JGAP000001)