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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000062

Type of data
NGS (Exome)
Access criteria
Controlled-access (Type I)
Total data volume
640 GB
File formats
  • BAM
Research
hum0053
Date published
2020-09-28
Date modified
2020-11-18
DDBJ Search
JGAD000062 (opens in a new tab)
JGA Study
JGAS000062 (opens in a new tab)

Analysis method

WES

Materials and participants
38 Malignant pleural mesothelioma patients
(38 pairs of tumor tissue and non-tumor tissue: 76 samples)
  • Health status
    Affected
  • Subject count
    38 (Individual)
Sample description
Genomic DNAs extracted from surgical specimens or established mesothelioma cell lines from malignant pleural mesothelioma patients
Control DNAs from peripheral blood cells of the same patients
  • Tissue
    Peripheral blood
  • Tumor / normal
    Mixed
Cell line
Mesothelioma cell line
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Human All Exon V4
SureSelect Human All Exon V5 + lincRNA
Fragmentation
Ultrasonic fragmentation (Covaris E220)
Platform
Illumina HiSeq 2000
Illumina HiSeq 2500
Read type
Paired-end
Read length
100 bp
Reference genome
GRCh37
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)