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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000047

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
3.7 TB
File formats
  • FASTQ
  • TAR
Research
hum0045
Date published
2020-09-28
Date modified
2020-11-18
DDBJ Search
JGAD000047 (opens in a new tab)
JGA Study
JGAS000047 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
99 Ph- ALLs
3 Ph+ ALLs,
5 cell lines
8 normal hematopoietic cells
  • Health status
    Mixed
  • Subject count
    115 (Mixed)
Sample description
[Ph- / + ALL cases]
mRNA extracted from peripheral blood cells or bone marrow aspirates
[cell lines, normal hematopoietic cells]
mRNA extracted from cultured cells
  • Tissue
    Bone marrow, Peripheral blood
  • Tumor / normal
    Mixed
Sample provider
cell lines, normal hematopoietic cells (Takara/Lonza)
Experimental method
RNA-seq
Target
N/A
Reagent kit
NEBNext Ultra Directional RNA Library Prep Kit for Illumina
Fragmentation
Heat treatment
Platform
Illumina HiSeq 2000
Illumina HiSeq 2500
Read type
Paired-end
Read length
104 bp
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)