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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000027

Type of data
NGS (ChIP-seq)
Access criteria
Controlled-access (Type I)
Total data volume
95.4 GB
File formats
  • FASTQ
  • XLSX
Research
hum0032
Date published
2020-09-28
Date modified
2020-11-18
DDBJ Search
JGAD000027 (opens in a new tab)
JGA Study
JGAS000027 (opens in a new tab)

Analysis method

ChIP-seq

Materials and participants
Normal and diseased human hepatocytes purified from partial hepatectomy specimens
- Normal human hepatocytes: 6
- HBV-positive human hepatocyte 1: 1
- HCV-positive human hepatocyte 1: 1
  • Health status
    Mixed
  • Subject count
    8 (Sample)
Sample description
gDNAs extracted from normal and diseased human hepatocytes purified from partial hepatectomy specimens
  • Tissue
    Hepatocyte
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
ChIP-seq
Target
N/A
Fragmentation
Ultrasonic fragmentation (BRANSON SLPe, amplitude 40%, on 30 sec and off 30 sec, 10 cycles, on ice)
Platform
Illumina HiSeq 2000
Illumina HiSeq 2500
Read type
Single-end
Read length
36 bp
Data use policy
NBDC data sharing policy (JGAP000001)