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Dataset ID

JGAD000011

Type of data: NGS (RNA-seq)
Access criteria: Controlled-access (Type I)
Total data volume: 112 GB
File formats: FASTQ
Research: hum0019
Date published: 2020-09-28
Date modified: 2022-11-16
DDBJ Search: JGAD000011 (opens in a new tab)
JGA Study: JGAS000011 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants: 17 gastrointestinal cancer patients; Health status
Affected
Subject count
17 (Individual)
Sample description: polyA RNAs were extracted from gastrointestinal cancer and non-cancerous tissues.; Tumor / normal
Mixed
Sample provider: N/A
Experimental method: RNA-seq
Target: N/A
Reagent kit: SureSelect XT RNA Target Enrichment
Fragmentation: RNA Seq Fragmentation Mix in the kit
Platform: Illumina HiSeq 2500
Read type: Paired-end
Read length: 100 bp
Data use policy: NBDC data sharing policy (JGAP000001)