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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0019-v1Release info

Latest

Research title

Systematic identification of long non-coding RNAs potentially involved in gastrointestinal cancer

Research overview

Aims
To identify novel long non-coding RNAs critically involved in gastrointestinal cancer.
Methods
Exome and RNA-seq experiments were performed to investigate quantitative and qualitative abnormalities of long non-coding RNAs in gastrointestinal cancer (Illumina HiSeq 2500)
Participants/materials
Genomic DNA and polyA RNA were extracted from specimens in 17 gastrointestinal cancer patients. Cancer and non-cancerous tissues were used: total 32 samples)
URL

Datasets

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
JGAD000011NGS (RNA-seq)
  • RNA-seq
Controlled-access (Type I)2020-09-28

Data provider

Principal investigator
Yasuhisa Shinomura
Affiliation
Department of Gastroenterology, Rheumatology and Clinical Immunology, Sapporo Medical University

Research projects

NameURL
Collaborate with Department of Molecular Biology, Sapporo Medical University

Grants

NameTitleProject number
KAKENHI Grant-in-Aid for Scientific Research (A)
Systematic investigation of quantitative and qualitative abnormalities of long non-coding RNAs critically involved in colorectal cancer
  • 24680092

Related publications

No related publications.

Controlled access users

Principal investigatorAffiliationCountry/RegionResearch titlePeriod of data useDataset ID
Michiaki HamadaHamada Laboratory, Faculty of Science and Engineering, Waseda UniversityJapanConstruction of RNA-targeted Drug Discovery Database2023-01-05 – 2027-10-31