Skip to content
NBDC Human Database

No datasets in the cart.

Go to the cart

Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

E-GEAD-635

Type of data
NGS (CITE-seq)
Access criteria
Unrestricted-access
Total data volume
323 MB
File formats
  • TXT
  • HDF5
Research
hum0416
Date published
2023-08-10
Date modified
2023-08-10
DDBJ Search
E-GEAD-635 (opens in a new tab)

Analysis method

CITE-seq

Materials and participants
microscopic polyangiitis (ICD10: M31.7): 8 cases
blood samples were collected from 3 patients twice and 5 patients once
7 healthy donors
  • Health status
    Mixed
  • Subject count
    15 (Individual)
Disease
microscopic polyangiitis (M317)
Sample description
RNAs extracted from a single cell isolated from PBMCs
  • Tissue
    PBMC, Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
CITE-seq
Target
N/A
Reagent kit
Chromium Next GEM Single Cell 5' v2
Fragmentation
Enzymatic fragmentation
Platform
Illumina HiSeq 2500
Illumina NovaSeq 6000
Read type
Paired-end
Read length
91 bp
Reference genome
GRCh38
QC and filtering
Cell Ranger Metrics
Analysis method
CellRanger (version 6.0.6)
Processed data type
Gene expression matrix
Data use policy
NBDC data sharing policy (JGAP000001)