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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0299-v1Release info

Latest

Research title

Analysis of chromosome background of cancerous mutations using a long read sequencer

Research overview

Aims
Whole genome sequencing using the newly available PromethION Q20 platform (Nanopore) to validate haplotype phasing analysis
Methods
Whole genome sequencing using the PromethION Q20 platform (Nanopore)
Participants/materials
Healthy white B-Lymphocyte cell line HG002 (NA24385)
URL
N/A

Datasets

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
DRA012759NGS (WGS)
  • WGS
Unrestricted-access2021-12-01

Data provider

Principal investigator
Yutaka Suzuki
Affiliation
Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo

Research projects

No research projects.

Grants

NameTitleProject number
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas
Identification of novel driver genes by whole genome sequencing of early stage lung tumors
  • 20H00545
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas
Integrative analysis of structural variants and DNA methylation statuses in lung cancer genomes using long read sequencing
  • 21J13203
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas
Platform for Advanced Genome Science
  • 16H06279
Project for Cancer Research and Therapeutic Evolution (P-CREATE), Japan Agency for Medical Research and Development (AMED)
Stratification of cancer patients by novel genomic aberrations using long-read sequencing technologies
  • JP21cm0106582
Project for Cancer Research and Therapeutic Evolution (P-CREATE), Japan Agency for Medical Research and Development (AMED)
Understanding the diversity of lung cancer genomic mutations induced by passive smoking and formulating therapeutic strategies
  • JP21cm0106577

Related publications

TitleDOIDataset ID
Phasing analysis of lung cancer genomes using a long read sequencer
https://doi.org/10.1038/s41467-022-31133-6 (opens in a new tab)