Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0179-v1Release info

Latest

Research title

Shotgun metagenome analysis of oral microbiome in MRONJ and healthy individuals

Research overview

Aims: To reveal to what extent long-read data of PromethION deeps our understanding of oral microbiome and virome
Methods: Shutgun metagenome sequencing of bulk DNA extracted from saliva stored in OMNIgeneORAL OM-501 using a enzymatic method
Participants/materials: Saliva of Japanese healthy individuals
URL: N/A

Datasets

Cart	Dataset ID	Type of data	Analysis method	Access criteria	Date published
	JGAD000268	Metagenome	Metagenomics	Controlled-access (Type I)	2020-09-28
	DRA009794	Metagenome	Metagenomics	Unrestricted-access	2020-03-16

Data provider

Principal investigator: Koji Yahara
Affiliation: Antimicrobial Resistance Research Center, National Institute of Infectious Diseases

Research projects

Name	URL
Neo-virology	http://neo-virology.org/en/ (opens in a new tab)

Grants

Name	Title	Project number
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas	Big data analysis of bacteriophages and host bacterial using the extended virome datasets and long-read sequencer	19H04846

Related publications

Title	DOI	Dataset ID
Long-read metagenomics using PromethION uncovers novel oral bacteriophages, their abundance, and interaction with host bacteria	https://doi.org/10.1038/s41467-020-20199-9 (opens in a new tab)	JGAD000268 DRA009794

Controlled access users

No use of the controlled access data has been recorded.