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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0122-v1Release info

Latest

Research title

Mutation analysis of iPS cells derived from commercially-avaialble human primary cells

Research overview

Aims
Elucidation of genome instability during genome reprogramming
Methods
Whole genome sequencing and copy number variation analysis using SNP array of iPS cells and their parental cells to identify genetic abberations
Participants/materials
Human iPS cells derived from commercially-available primary cells
URL

Datasets

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
DRA006622NGS (WGS)
  • WGS
Unrestricted-access2019-11-14
DRA007336NGS (WGS)
  • WGS
Unrestricted-access2019-11-14
DRA008459NGS (WGS)
  • WGS
Unrestricted-access2019-11-14
E-GEAD-311SNP array
  • Genotyping by array (SNVs/CNVs)
Unrestricted-access2019-11-14

Data provider

Principal investigator
Ryoko Araki
Affiliation
National Institutes for Quantum and Radiological Science and Technology, National Institute of Radiological Sciences, Department of Basic Medical Sciences for Radiation Damages
Principal investigator
Masumi Abe
Affiliation
National Institutes for Quantum and Radiological Science and Technology, National Institute of Radiological Sciences, Department of Basic Medical Sciences for Radiation Damages

Research projects

NameURL
Stem cell biology group
N/A

Grants

NameTitleProject number
KAKENHI Grant-in-Aid for Scientific Research (B)
Point mutations associated with genome reprogramming
  • 17H03615
KAKENHI Grant-in-Aid for challenging Exploratory Research
Development of genome-wide analysis for radiation effects
  • 17K20053

Related publications

TitleDOIDataset ID
Genetic aberrations in iPSCs are introduced by a transient G1/S cell cycle checkpoint deficiency
https://doi.org/10.1038/s41467-019-13830-x (opens in a new tab)