Skip to content
NBDC Human Database

No datasets in the cart.

Go to the cart

Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

DRA008459

Type of data
NGS (WGS)
Access criteria
Unrestricted-access
Total data volume
884 GB
File formats
  • FASTQ
Research
hum0122
Date published
2019-11-14
Date modified
2019-11-14
DDBJ Search
DRA008459 (opens in a new tab)

Analysis method

WGS

Materials and participants
Mononuclear Cells from Cord Blood (Takara D10118): 4 sample (CB_1, CB_2-1, CB_2-2, and CB_2-3)
- iPS cells derived from CB_1: 5 samples
- iPS cells derived from CB_2-1: 3 samples
- iPS cells derived from CB_2-2: 3 samples
- iPS cells derived from CB_2-3: 3 samples
Human Dermal Fibroblast (KURABO KF4109): 1 sample (adult human dermal fibroblast [HDFa])
- iPS cells derived from HDFa: 8 samples
  • Health status
    Healthy
  • Subject count
    27 (Sample)
  • Age group
    Adult
Sample description
DNAs extracted from iPS cells and their parental cells
  • Tissue
    Cord blood, Cord blood mononuclear cell, Dermal fibroblast, iPSC
  • Tumor / normal
    Normal
Cell line
Cord blood mononuclear cell (TaKaRa D10118)
HDFa (KURABO KF4109)
Sample provider
TaKaRa Bio (D10118):
http://catalog.takara-bio.co.jp/product/basic_info.php?unitid=U100007076
KURABO (KF4109):
https://www.kurabo.co.jp/bio/product/products.php?M=L&A=C&PPID=118
Experimental method
WGS
Target
N/A
Reagent kit
TruSeq DNA PCR-Free Library Prep Kit
Fragmentation
Ultrasonic fragmentation
Platform
Illumina HiSeq X
Read type
Paired-end
Read length
400 bp
Data use policy
NBDC data sharing policy (JGAP000001)