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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0016-v1Release info

Latest

Research title

Epigenome analysis of proteins expressed in human testis

Research overview

Aims
To elucidate the mechanism of chromatin formation in human sperm cells.
Methods
Analysis of ChIP-seq data of the testis-specific histone variant H3.5 (with H3.3 as control) and RNA-seq data in testis cells
Participants/materials
Normal testis cells
URL
N/A

Datasets

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
DRA002604NGS (ChIP-seq, RNA-seq)
  • ChIP-seq (H3.3/H3.5) + Input + RNA-seq
Unrestricted-access2015-01-22

Data provider

Principal investigator
Yasuyuki Ohkawa
Affiliation
Division of Transcriptomics, Medical Institute of Bioregulation, Kyushu university

Research projects

No research projects.

Grants

NameTitleProject number
KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area: Dynamic chromatin structure and function)
Exploring chromatin dynamics in cell differentiation
  • 25116010

Related publications

TitleDOIDataset ID
Histone H3.5 forms an unstable nucleosome and accumulates around transcription start sites in human testis
https://doi.org/10.1186/s13072-016-0051-y (opens in a new tab)