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NBDC Human Database

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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

List of processed data (Whole Genome Sequencing Analysis)

#Target datasets

JGA dataset Study title #. Samples Date of data processing Remarks
JGAD000252 Cancer genomics for elucidation of molecular mechanisms of carcinogenecis and progression in lung cancer (hum0068) 21 Per-sample:2021-12-27 QC:2022-01-06 Joint-call:2022-01-26 This dataset includes the whole genome sequencing analysis (WGS) data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000670
JGAD000235 Genome sequencing analysis for colorectal cancer (hum0159) 10 Per-sample:2021-12-27 QC:2022-01-06 Joint-call:2022-01-31 This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000689
JGAD000234 Genome sequencing analysis for hepatoblastoma (hum0161) 33 Per-sample:2021-12-27 QC:2022-01-06 Joint-call:2022-01-31 This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000688
JGAD000335 Collection and transfer of human tumor samples and research using genomic information Transfer of existing samples and research using genomic information Reseach of searching gene mutations in gastrointestinal chronic inflammatory diseases (hum0201) 14 Per-sample:2021-12-27 QC:2022-01-06 Joint-call:2022-01-06 This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000687
JGAD000220 Bio Bank Japan project (hum0014) 1,026 Per-sample:2022-01-16 QC:2022-02-24 Data processing was performed on the WGS data of 1,026 individuals registered to the Biobank Japan Project from FY 2003 to FY 2007. Dataset ID of the processed data: JGAD000690
JGAD000220 Bio Bank Japan project (hum0014) 1,026 Joint-call: 2023-01-30 (autosome and chrX PAR regions; BOTHSEX), 2023-02-25 (chrX non-PAR regions; FEMALE samples), 2023-03-02 (chrXY non-PAR regions; MALE samples) Data processing was performed on the WGS data of 1,026 individuals registered to the Biobank Japan Project from FY 2003 to FY 2007. Joint-call was performed for genotype calls. Dataset ID of the processed data: JGAD000758

*In order to use the processed data, it is necessary to apply the application for data use of the original data (Dataset IDs are shown on the most left side of the above table).

How to apply the application for data use?