Target datasets
| JGA dataset | Study title | #. Samples | Date of data processing | Remarks |
|---|---|---|---|---|
| JGAD000252 | Cancer genomics for elucidation of molecular mechanisms of carcinogenecis and progression in lung cancer (hum0068) | 21 | Per-sample：2021-12-27 QC：2022-01-06 Joint-call：2022-01-26 |
This dataset includes the whole genome sequencing analysis (WGS) data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000670 |
| JGAD000235 | Genome sequencing analysis for colorectal cancer (hum0159) | 10 | Per-sample：2021-12-27 QC：2022-01-06 Joint-call：2022-01-31 |
This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000689 |
| JGAD000234 | Genome sequencing analysis for hepatoblastoma (hum0161) | 33 | Per-sample：2021-12-27 QC：2022-01-06 Joint-call：2022-01-31 |
This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000688 |
| JGAD000335 | Collection and transfer of human tumor samples and research using genomic information Transfer of existing samples and research using genomic information Reseach of searching gene mutations in gastrointestinal chronic inflammatory diseases (hum0201) |
14 | Per-sample：2021-12-27 QC：2022-01-06 Joint-call：2022-01-06 |
This dataset includes WGS data of tumor and matched control samples. WGS data of the matched control (germline) were processed. Dataset ID of the processed data: JGAD000687 |
| JGAD000220 | Bio Bank Japan project (hum0014) | 1,026 | Per-sample：2022-01-16 QC：2022-02-24 |
Data processing was performed on the WGS data of 1,026 individuals registered to the Biobank Japan Project from FY 2003 to FY 2007. Dataset ID of the processed data: JGAD000690 |
| JGAD000220 | Bio Bank Japan project (hum0014) | 1,026 | Joint-call： 2023-01-30 (autosome and chrX PAR regions; BOTHSEX), 2023-02-25 (chrX non-PAR regions; FEMALE samples), 2023-03-02 (chrXY non-PAR regions; MALE samples) |
Data processing was performed on the WGS data of 1,026 individuals registered to the Biobank Japan Project from FY 2003 to FY 2007. Joint-call was performed for genotype calls. Dataset ID of the processed data: JGAD000758 |
*In order to use the processed data, it is necessary to apply the application for data use of the original data (Dataset IDs are shown on the most left side of the above table).
