Dataset ID
NHA000178
- Type of data
- MAG, Viral genome and CRISPR spacers of Microbial genome
- Access criteria
- Unrestricted-access
- Research
- hum0197
- Date published
- 2022-12-01
- Date modified
- 2022-12-01
- Secondary ID
- hum0197.v12.MAG.v1
Analysis method
Metagenomics
- Materials and participants
- Japanese gut microbiome
JGAS000205 / JGAS000260 / JGAS000316 / JGAS000415 / JGAS000530 / JGAS000531, Public data (DRA006684) - PopulationJapanese
- Sample description
- JGAS000205 / JGAS000260 / JGAS000316 / JGAS000415 / JGAS000530 / JGAS000531, DRA006684
- Sample provider
- N/A
- Experimental method
- Metagenomics
- Target
- N/A
- Platform
- Illumina HiSeq 2500
Illumina HiSeq 3000
Illumina NovaSeq 6000 - Analysis method
- De novo assembly with metaspades was performed. Then, binning with dastools (metabat2, maxbin2, concoct) was applied.
- Processed data type
- MAG
- INSDC Sequence Accession
- JGA MAG: 20220531NSUB000031HIGH_JGA_JMAG_GENOME_*.acclist.txt
TPA MAG: EMNX01000001-EMNX01000025, EMNY01000001-EMNY01000068, EMNZ01000001-EMNZ01000149, EMOA01000001-EMOA01000067 - Data use policy
- NBDC data sharing policy (JGAP000001)