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Dataset ID

NHA000165

Type of data
GWAS for Idiopathic hypersomnia
Access criteria
Unrestricted-access
Total data volume
31.1 MB
File formats
  • XLSX
  • ZIP
Research
hum0264
Date published
2022-02-07
Date modified
2022-02-07
Secondary ID
hum0264.v1.gwas.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0264_header_definition.xlsxDictionary file10.0 KB
hum0264_v1_gwas_v1.zip31.1 MB

Analysis method

Genotyping by array

Materials and participants
Idiopathic hypersomnia (ICD10: G47.11): 129 patients
(13 orexin mutation-positive patients, 116 orexin mutation-negative patients)
  • Health status
    Affected
  • Subject count
    129 (Individual)
Disease
Idiopathic hypersomnia (G471)
Sample description
DNAs extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Genome-Wide Human SNP Array 6.0 Kit
Platform
Affymetrix Genome-Wide Human SNP Array 6.0
Reference genome
GRCh37
QC and filtering
SNP call rate < 0.97, HWE P < 0.001, MAF < 0.05, non-autosomal chromosomes
Analysis method
GeneChip Operating Software (GCOS), Genotyping Console 4.0
Variant count
487,321 SNPs
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)