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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

NHA000135

Type of data
eQTL
Access criteria
Unrestricted-access
Total data volume
55.7 MB
File formats
  • XLSX
  • ZIP
Research
hum0207
Date published
2020-01-06
Date modified
2020-01-06
Secondary ID
hum0207.v1.eQTL.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0207.v1.eQTL.v1.zip55.7 MB
hum0207.v1_header.xlsxDictionary file17.0 KB

Analysis method

Genotyping by array

Materials and participants
rheumatoid arthritis (ICD10: M05): 30 cases
osteoarthritis (ICD10: M06): 30 cases
  • Health status
    Affected
  • Subject count
    60 (Individual)
Disease
rheumatoid arthritis (M05)
osteoarthritis (M06)
Sample description
DNAs extracted from cells from rheumatoid arthritis and osteoarthritis patients
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Platform
Illumina HumanOmniExpressExome
QC and filtering
SNP call rate > 0.99, HWE < 1 × 10-6, sample call rate > 0.98
Imputation
IMPUTE2
Variant count
595,693 SNVs
Data use policy
NBDC data sharing policy (JGAP000001)