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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

NHA000051

Type of data
eQTL
(Summary of stats for each variant [ex. effect size, P-value])
Access criteria
Unrestricted-access
Total data volume
1.8 GB
File formats
  • ZIP
Research
hum0099
Date published
2017-04-24
Date modified
2017-04-24
Secondary ID
hum0099.v1.eqtl.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0099.v1.eqtl.v1.zip1.8 GB

Analysis method

Genotyping by array

Materials and participants
105 healthy volunteers (21 males, 84 females)
  • Health status
    Healthy
  • Subject count
    105 (Individual)
  • Sex
    Mixed
Sample description
gDNA extracted from whole blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
HumanOmniExpressExome BeadChip Kit
Platform
Illumina HumanOmniExpressExome
Reference genome
GRCh37
QC and filtering
MAF ≥ 0.05, average maximum posterior probability ≥ 0.9, INFO ≥ 0.4 (5,600,101 variants)
Imputation
IMPUTE2 + 1000 Genomes Phase 1 v3
Analysis method
GenCall software (GenomeStudio)
Variant count
563,436 SNPs
Processed data type
Variant calls
Data use policy
NBDC data sharing policy (JGAP000001)