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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001144

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
117 GB
File formats
  • FASTQ
Research
hum0611
Date published
2026-11-10
Date modified
2026-11-10
DDBJ Search
JGAD001144 (opens in a new tab)
JGA Study
JGAS000979 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Patients with hematologic disorders
- cGVHD+: 3 cases
- cGVHD–: 3 cases
A total of 12 peripheral blood samples
- CD4+ T-cell: 6 samples
- CD8+ T-cell: 6 samples
  • Health status
    Affected
  • Subject count
    6 (Individual)
  • Population
    Japanese
Disease
  • chronic graft-versus-host disease (cGVHD)
Sample description
RNA extracted from CD4+ and CD8+ T-cell isolated from peripheral blood
  • Tissue
    CD4+ T cell, CD8+ T cell, Peripheral blood
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
IDT for Illumina DNA/RNA UD Indexes
Nextera XT DNA Library Prep Kit
SMART-Seq mRNA
Fragmentation
Tagmentation (Nextera XT DNA Library Prep Kit)
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)

RNA-seq

Materials and participants
cGVHD: 1 case, total 4 samples
- in vitrofisetin-treated CD4+ and CD8+ T-cell from peripheral blood
- in vitro fisetin-untreated CD4+ and CD8+ T-cell from peripheral blood
  • Health status
    Affected
  • Subject count
    1 (Individual)
  • Population
    Japanese
Disease
  • chronic graft-versus-host disease (GVHD)
Sample description
RNA extracted from CD4+ and CD8+ T-cell isolated from peripheral blood
  • Tissue
    CD4+ T cell, CD8+ T cell, Peripheral blood
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
IDT for Illumina DNA/RNA UD Indexes
Nextera XT DNA Library Prep Kit
SMART-Seq mRNA
Fragmentation
Tagmentation (Nextera XT DNA Library Prep Kit)
Platform
Illumina NovaSeq X Plus
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)