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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001073

Type of data
NGS (Exome)
SNP-chip
Access criteria
Controlled-access (Type I)
Total data volume
40.4 GB
File formats
  • FASTQ
  • IDAT
Research
hum0444
Date published
2026-08-04
Date modified
2026-08-04
DDBJ Search
JGAD001073 (opens in a new tab)
JGA Study
JGAS000929 (opens in a new tab)

Analysis method

WES

Materials and participants
nevus spilus-type congenital melanocytic nevus (NS-CMN) (ICD10: D22.5): 2 cases
skin: 6 samples (lesion: 6 samples)
  • Health status
    Affected
  • Subject count
    2 (Individual)
Disease
nevus spilus-type congenital melanocytic nevus (NS-CMN) (D225)
Sample description
DNAs extracted from skin
  • Tissue
    Skin
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Human All Exon V6
Fragmentation
Ultrasonic fragmentation
Platform
Illumina NovaSeq X Plus
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)

genome wide SNPs

Materials and participants
nevus spilus-type congenital melanocytic nevus (NS-CMN) (ICD10: D22.5): 3 cases
skin: 54 samples (lesion: 54 samples)
peripheral blood: 3 samples
nevus spilus-type congenital melanocytic nevus (NS-CMN) (ICD10: D22.5): 1 case
cultured cell: 11 samples (lesion: 11 samples)
  • Health status
    Affected
  • Subject count
    4 (Individual)
Disease
nevus spilus-type congenital melanocytic nevus (NS-CMN) (D225)
Sample description
DNAs extracted from skin, peripheral blood and cultured cell
  • Tissue
    Cultured cell, Peripheral blood, Skin
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Infinium Asian Screening Array Kit
Platform
Illumina Infinium Asian Screening Array
Analysis method
GenomeStudio 2.0
Variant count
659,184
Data use policy
NBDC data sharing policy (JGAP000001)