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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001057

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
881 GB
File formats
  • FASTQ
  • TXT
Research
hum0575
Date published
2026-07-16
Date modified
2026-07-16
DDBJ Search
JGAD001057 (opens in a new tab)
JGA Study
JGAS000913 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
renal cell carcinoma (ICD10: C64): 201 patients
tumor tissue: 201 samples
non-tumor tissue (normal renal cortex): 201 samples
  • Health status
    Affected
  • Subject count
    201 (Individual)
Disease
renal cell carcinoma (C64)
Sample description
RNAs extracted from tumor and non-tumor tissues
  • Tissue
    Renal cortex
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
SureSelect Strand-Specific RNA Library Prep Kit
Fragmentation
Heat treatment
Platform
Illumina HiSeq 1500
Illumina HiSeq 2500
Illumina NextSeq 550
Read type
Paired-end
Read length
76 bp
Reference genome
GRCh38
Mapping
HISAT2 ver2.2.1
Mapping quality
FastQC
Analysis method
FeatureCounts ver2.0.1
Gene count
60,671 (Ensembl ID)
Processed data type
TPM
Data use policy
NBDC data sharing policy (JGAP000001)