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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD001006

Type of data
NGS (Target Capture, RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
435 KB
File formats
  • XLSX
Research
hum0548
Date published
2026-02-05
Date modified
2026-02-05
DDBJ Search
JGAD001006 (opens in a new tab)
JGA Study
JGAS000863 (opens in a new tab)

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
ACTOnco_Gene_List.xlsxACTOnco Comprehensive 440-Gene Cancer Panel20.2 KB

Analysis method

Targeted DNA sequencing + RNA-seq

Materials and participants
adult solid tumor (ICD10: C162, C169, C163, C160, C158, C161, C221, C251, C254, C220, C253, C250, D377, C240, C252, C787, C182, D137, C480, C788, C19, C170, C20, C23, C241, D376, D372, C171, J690, C187, C258, C64, C259, C248, C060, C029, C030, C031, C439, D480, C049, C062, C310, D370, C091, C050, C081, C080, D165, C151, C150, C159, C155, C153, C152, C12, C021, C040, C312, C01, C131, C73, C321, C300, C07, C041, D385, C311, D355, C490, C020, C102, C320, H618, C186, C189, C184, C180, C211, C181, C504, C505, C509, C500, C502, C503, C569, C501, D486, C508, C341, C343, C450, D487, C349, C342, C80, C33, D383, C629, C66, C675, D401, D350, C61, C541, C539, C56, C549, C482, C542, C530): 1,996 cases
tumor tissues (FFPE samples): 1,996 samples
  • Health status
    Affected
  • Subject count
    1996 (Individual)
  • Age group
    Adult
Disease
  • adult solid tumor
Sample description
DNAs/RNAs extracted from tumor tissues
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
RNA-seq
Targeted DNA sequencing
Target
ACTOnco Comprehensive 440-Gene Cancer Panel (440 genes + 31 fusion genes)
Reagent kit
Ion AmpliSeq Library Kit
Fragmentation
Amplicon PCR
Platform
Thermo Fisher Scientific Ion Proton
Read type
Single-end
Reference genome
GRCh37
Mapping
[DNA] Ion Torrent Suite
[RNA] ACT SOP protocol
Mapping quality
[DNA] Not specified (variant-level coverage filtering applied)
[RNA] ACT SOP protocol
Coverage (depth)
NGS Sequencing Mean Depth: 500x (Or more)
Total depth: 20,000x (Or more)
Processed data type
Clinical characteristics
CNV summary
Fusion summary
Variant summary
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)