Skip to content
NBDC Human Database

No datasets in the cart.

Go to the cart

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000989

Type of data
NGS
（RNA-seq, ChIP-seq）
Access criteria
Controlled-access (Type I)
Total data volume
93.8 GB
File formats
  • FASTQ
  • GZIP
Research
hum0231
Date published
2026-11-06
Date modified
2026-11-06
DDBJ Search
JGAD000989 (opens in a new tab)
JGA Study
JGAS000847 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Monocytes and macrophages differentiated from iPS cells (including genome-edited strains) derived from two healthy donors
- 39 samples
  • Health status
    Healthy
  • Subject count
    2 (Individual)
  • Population
    Japanese
Sample description
RNAs extracted from monocytes and macrophages differentiated from iPS cells (including genome-edited strains) derived from healthy donors
  • Tissue
    macrophage, Monocyte
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
ThruPLEX DNA-Seq Kit
Fragmentation
Ultrasonic fragmentation (Covaris M220)
Platform
Illumina NextSeq 500
Read type
Single-end
Read length
75 bp
Data use policy
NBDC data sharing policy (JGAP000001)

ChIP-seq

Materials and participants
Macrophages differentiated from iPS cells (including genome-edited strains) derived from two healthy donors
- 37 samples
  • Health status
    Healthy
  • Subject count
    2 (Individual)
  • Population
    Japanese
Sample description
DNAs extracted from macrophages differentiated from iPS cells, and immunoprecipitated with anti-H3K27ac, H3K4me1, CTCF, SMC1A, IRF8, PU1, MAFB or BCL6 antibodies.
  • Tissue
    macrophage
Sample provider
N/A
Experimental method
ChIP-seq
Target
N/A
Reagent kit
ThruPLEX DNA-Seq Kit
Fragmentation
Ultrasonic fragmentation
Platform
Illumina NextSeq 500
Read type
Single-end
Read length
75 bp
Data use policy
NBDC data sharing policy (JGAP000001)