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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000951

Type of data
NGS (Exome)
Access criteria
Controlled-access (Type I)
Total data volume
971 GB
File formats
  • BAM
Research
hum0517
Date published
2025-06-18
Date modified
2025-06-18
DDBJ Search
JGAD000951 (opens in a new tab)
JGA Study
JGAS000809 (opens in a new tab)

Analysis method

WES

Materials and participants
Endometrial cancer (ICD10: C549): 30 cases
tumor tissue: 30 samples
PDX tumor tissue: 31 samples
  • Health status
    Affected
  • Subject count
    61 (Sample)
Disease
Endometrial cancer (C549)
Sample description
DNAs extracted from tumor tissues and PDX tumor tissues
  • Tissue
    PDX
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Clinical Research Panel v2
Fragmentation
Enzymatic fragmentation
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
75 bp
Reference genome
GRCh37
Mapping
BWA-MEM (v0.7.15)
Mapping quality
Reads with MAPQ<20 were excluded during variant calling using Mutect2 (GATK v4.1.1.0)
Coverage (depth)
115x
Data use policy
NBDC data sharing policy (JGAP000001)