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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000937

Type of data
NGS (scRNA-seq, scTCR-seq)
Access criteria
Controlled-access (Type I)
Total data volume
93.6 GB
File formats
  • FASTQ
  • BAM
  • BAI
  • CSV
  • JSON
  • HDF5
Research
hum0513
Date published
2026-09-08
Date modified
2026-09-08
DDBJ Search
JGAD000937 (opens in a new tab)
JGA Study
JGAS000795 (opens in a new tab)

Analysis method

scRNA-seq

Materials and participants
healthy donors, day 365 after the booster, 3rd vaccination: 14 individuals
peripheral blood mononuclear cells (PBMC): 14 samples
  • Health status
    Healthy
  • Subject count
    14 (Individual)
  • Population
    Japanese
Sample description
RNA extracted from PBMC
  • Tissue
    PBMC, Peripheral blood
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Reagent kit
Chromium Next GEM Single Cell 5' v2
Fragmentation
included in the above library construction kit
Platform
MGI DNBSEQ-G400
Read type
Paired-end
Read length
100 bp
Reference genome
GRCh38
Mapping
STAR
QC and filtering
N/A
Analysis method
Cell Ranger 7.1.0
Gene count
25,170
Data use policy
NBDC data sharing policy (JGAP000001)

scTCR-seq

Materials and participants
healthy donors, day 365 after the booster, 3rd vaccination: 14 individuals
peripheral blood mononuclear cells (PBMC): 14 samples
  • Health status
    Healthy
  • Subject count
    14 (Individual)
  • Population
    Japanese
Sample description
RNA extracted from PBMC
  • Tissue
    PBMC, Peripheral blood
Sample provider
N/A
Experimental method
TCR-seq
Target
N/A
Reagent kit
Chromium Single Cell Human TCR Amplification Kit
Fragmentation
included in the above library construction kit
Platform
MGI DNBSEQ-G400
Read type
Paired-end
Read length
100 bp
Reference genome
GRCh38
Mapping
STAR
QC and filtering
N/A
Analysis method
Cell Ranger 7.1.0
Data use policy
NBDC data sharing policy (JGAP000001)