Dataset ID

JGAD000924

Name: JGAD000924: target sequencings on the coding regions of TP53 in 140,597 individuals, including those with breast cancer, stomach cancer, colon cancer, heart failure, stroke, etc.
Published: 2025-06-05

Type of data: target sequencings on the coding regions of TP53 in 140,597 individuals, including those with breast cancer, stomach cancer, colon cancer, heart failure, stroke, etc.
Access criteria: Controlled-access (Type I)
Total data volume: 170 GB
File formats: FASTQ
Research: hum0014
Date published: 2025-06-05
Date modified: 2025-06-05
DDBJ Search: JGAD000924 (opens in a new tab)
JGA Study: JGAS000782 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants: 10,008 breast cancer patients (ICD10: C50)
10,576 gastric cancer patients (ICD10: C16)
13,922 colorectal cancer patients (ICD10: C18)
6,038 heart failure patients (ICD10: I50)
10,486 stroke patients (ICD10: I63)
and others
Total: 140,597 individuals; Health status
Affected
Subject count
140,597 (Individual)
Disease: breast cancer patients
gastric cancer patients
colorectal cancer patients
heart failure patients
stroke patients
Sample description: DNA extracted from peripheral blood cells; Tissue
Peripheral blood
Tumor / normal
Normal
Sample provider: N/A
Experimental method: Targeted DNA sequencing
Target: Coding region of TP53
Reagent kit: KAPA HiFi DNA Polymerase
2X Platinum Multiplex PCR Master Mix
Fragmentation: N/A
Platform: Illumina HiSeq 2500
Illumina NovaSeq 6000
Read type: Paired-end
Read length: 150 bp
Data use policy: NBDC data sharing policy (JGAP000001)