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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000911

Type of data
NGS (scRNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
126 GB
File formats
  • BAM
Research
hum0490
Date published
2024-12-20
Date modified
2025-12-11
DDBJ Search
JGAD000911 (opens in a new tab)
JGA Study
JGAS000770 (opens in a new tab)

Analysis method

scRNA-seq

Materials and participants
infertility patients with normal ovarian function (ICD10: N97): 16 cases
- treated with GnRH-ant: 8 cases
- treated with PPOS: 8 cases
  • Health status
    Affected
  • Subject count
    16 (Individual)
Disease
infertility patients with normal ovarian function (N97)
Sample description
RNAs extracted from granulosa cells which mixed within each group to form the GnRH-ant and PPOS
  • Tissue
    Granulosa cell
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Reagent kit
Chromium Single Cell V(D)J
Fragmentation
Enzymatic fragmentation (10x Genomics Kit)
Platform
MGI DNBSEQ-G400
Read type
Paired-end
Read length
72 bp (R1)
91 bp (R2)
Reference genome
GRCh38
Mapping
10x Genomics Cell Ranger Count
Mapping quality
Reads Mapped to Genome 98.9% (TFHS000278), 98.6% (TFHS000279)
Data use policy
NBDC data sharing policy (JGAP000001)