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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000895

Type of data
NGS (WGS, RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
667 GB
File formats
  • FASTQ
Research
hum0485
Date published
2025-04-30
Date modified
2025-04-30
DDBJ Search
JGAD000895 (opens in a new tab)
JGA Study
JGAS000754 (opens in a new tab)

Analysis method

WGS

Materials and participants
gastric cancer (ICD10: C16.9): 65 cases
tumor: 65 samples
non-tumor: 65 samples
  • Health status
    Affected
  • Subject count
    65 (Individual)
Disease
gastric cancer (C169)
Sample description
DNAs extracted from tumor and non-tumor tissues
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WGS
Target
N/A
Reagent kit
TruSeq Nano DNA Library Prep Kit
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2500
Read type
Paired-end
Read length
126 bp
Data use policy
NBDC data sharing policy (JGAP000001)

RNA-seq

Materials and participants
gastric cancer (ICD10: C16.9): 65 cases
tumor: 65 samples
  • Health status
    Affected
  • Subject count
    65 (Individual)
Disease
gastric cancer (C169)
Sample description
RNAs extracted from tumor tissues
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
KAPA RNA HyperPrep Kit with RiboErase
Fragmentation
Heat treatment
Platform
Illumina HiSeq 2000
Illumina HiSeq 2500
Read type
Paired-end
Read length
126 bp
Data use policy
NBDC data sharing policy (JGAP000001)