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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000857

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
244 GB
File formats
  • FASTQ
Research
hum0473
Date published
2025-06-30
Date modified
2025-06-30
DDBJ Search
JGAD000857 (opens in a new tab)
JGA Study
JGAS000724 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
MDS (ICD10: D46): 57 cases
Healthy donors: 5 individuals
Mononuclear cells (MNCs) isolated from bone marrow aspirates: 62 samples in total
  • Health status
    Mixed
  • Subject count
    62 (Individual)
Disease
MDS (D46)
Sample description
RNAs extracted from CD34+ cells purified from bone marrow MNCs
  • Tissue
    Bone marrow, Bone marrow mononuclear cell
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
NEBNext Poly(A) mRNA Magnetic Isolation Module
NEBNext Ultra II Directional RNA Library Prep Kit for Illumina
Fragmentation
NEBNext Magnesium RNA Fragmentation Module
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)