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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000834

Type of data
low-depth WGS for 2,067 gastric cancer patients
Access criteria
Controlled-access (Type I)
Total data volume
18.7 TB
File formats
  • FASTQ
Research
hum0014
Date published
2024-05-27
Date modified
2024-05-27
DDBJ Search
JGAD000834 (opens in a new tab)
JGA Study
JGAS000701 (opens in a new tab)

Analysis method

WGS

Materials and participants
2,067 gastric cancer (ICD10: C16) patients registered in BBJ 1st cohort
  • Health status
    Affected
  • Subject count
    2067 (Individual)
  • Cohort
    BioBank Japan
Disease
  • gastric cancer
Sample description
DNA extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
WGS
Target
N/A
Reagent kit
TruSeq Nano DNA Library Prep Kit
Fragmentation
Ultrasonic fragmentation
Platform
Illumina HiSeq 2500
Read type
Paired-end
Read length
125 bp
Data use policy
NBDC data sharing policy (JGAP000001)