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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000795

Type of data
NGS (scRNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
5.7 GB
File formats
  • FASTQ
  • TXT
Research
hum0435
Date published
2024-03-18
Date modified
2024-03-18
DDBJ Search
JGAD000795 (opens in a new tab)
JGA Study
JGAS000665 (opens in a new tab)

Analysis method

scRNA-seq

Materials and participants
Cardiomyocytes differentiated from human iPS cells established from healthy donor cells: 1 sample
  • Health status
    Healthy
  • Subject count
    1 (Sample)
Sample description
RNAs extracted from cardiomyocytes differentiated from human iPS cells
  • Tissue
    iPSC-derived cardiomyocyte
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Reagent kit
Nextera XT DNA Library Prep Kit
Fragmentation
Nextera XT DNA sample preparation Kit
Platform
Illumina HiSeq 3000
Read type
Single-end
Read length
100 bp
Reference genome
GRCh38
Mapping
STAR (mappa/hanta pipeline)
QC and filtering
Cutadapt (mappa/hanta pipeline)
Analysis method
Subread (mappa/hanta pipeline)
Gene count
58,736
Data use policy
NBDC data sharing policy (JGAP000001)