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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000729

Type of data
Metagenome
Access criteria
Controlled-access (Type I)
Total data volume
2.6 TB
File formats
  • FASTQ
Research
hum0197
Date published
2023-03-30
Date modified
2023-03-30
DDBJ Search
JGAD000729 (opens in a new tab)
JGA Study
JGAS000600 (opens in a new tab)

Analysis method

Metagenomics

Materials and participants
88 Japanese individuals (shotgun sequencing)
73 healthy individuals (shotgun sequencing)
- DNA extraction was performed with phenol-chloroform extraction: 73 samples
- DNA extraction with DNeasy PowerSoil Pro kit: 47 samples
5 Japanese individuals (deep shotgun sequencing)
  • Subject count
    166 (Individual)
  • Population
    Japanese
Sample description
DNA extracted from gut microbiome
  • Tissue
    Feces
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Metagenomics
Target
N/A
Reagent kit
KAPA Hyper Prep Kit
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 3000
Illumina NovaSeq 6000
Read type
Paired-end
Read length
150 bp
Data use policy
NBDC data sharing policy (JGAP000001)