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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000664

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
189 GB
File formats
  • FASTQ
Research
hum0352
Date published
2022-09-21
Date modified
2022-11-17

Analysis method

RNA-seq

Materials and participants
primary lung cancer (ICD10: C340): 5 cases
blood obtained before radiotherapy, at the end of treatment, and 2-4 weeks after treatment, 15 samples in total
  • Health status
    Affected
  • Subject count
    5 (Individual)
Disease
primary lung cancer (C340)
Sample description
RNAs extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
TruSeq Stranded mRNA Library Prep Kit
Fragmentation
TruSeq Stranded mRNA LT Sample Prep Kit
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
100 bp