Dataset ID
JGAD000657
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 513 GB
- File formats
- FASTQ
- Research
- hum0342
- Date published
- 2022-05-27
- Date modified
- 2022-05-27
- DDBJ Search
- JGAD000657 (opens in a new tab)
- JGA Study
- JGAS000538 (opens in a new tab)
Analysis method
WES
- Materials and participants
- Colorectal cancer (ICD10: C18): 29 cases
tumor tissues: 29 samples, non-tumor tissues: 29 samples - Health statusAffected
- Subject count29 (Individual)
- Disease
- Colorectal cancer (C18)
- Sample description
- DNAs extracted from tumor and non-tumor tissues
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V6
- Fragmentation
- Ultrasonic fragmentation (Covaris)
- Platform
- Illumina NovaSeq 6000
- Read type
- Paired-end
- Read length
- 150 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)