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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000529

Type of data
Genotype data for 11,716 patients from BBJ 1st cohort and 42,689 patients from BBJ 2nd cohort
Access criteria
Controlled-access (Type I)
Total data volume
1.1 TB
File formats
  • BED
  • BIM
  • FAM
  • IDAT
  • CSV
Research
hum0311
Date published
2021-12-13
Date modified
2021-12-13
DDBJ Search
JGAD000529 (opens in a new tab)
JGA Study
JGAS000412 (opens in a new tab)

Analysis method

Genotyping by array

Materials and participants
11,716 patients from BBJ 1st cohort and 42,689 patients from BBJ 2nd cohort
ICD10: C34, C15, C16, C18-C21, C22, C25, C23, C24, C61, C50, C53, C54, C56, C81-C86, C90-C93, I63, G45.9, I67.1, G40, J45, A15-A19, J44.9, J84.1-9, I21.0-9, I20.0, I20.1, I20.8, I20.9, R00, I44.0-3, I45.5-6, I47-I49, I50, I70.9, B18.1, B18.2, K74.6, N04, N20-N23, M80-M81, E10, E11, E88.8, E78.0-5, E78.8-9, E05.0, M05-M06, J30.1, L91.0, L20, L51.1-2, L27.0, D25, N80, R56.0, H40, H25-H26, K05, G12.2, I61, C64
  • Health status
    Affected
  • Subject count
    54,405 (Individual)
  • Cohort
    BioBank Japan
  • Population
    Japanese
Sample description
DNAs extracted from peripheral blood cells or saliva
  • Tissue
    Peripheral blood, Saliva
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Infinium Asian Screening Array Kit
Platform
Illumina Infinium Asian Screening Array
Reference genome
GRCh38
Analysis method
GenomeStudio
Variant count
657,060 SNVs
Data use policy
NBDC data sharing policy (JGAP000001)